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Remove internal file paths
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samuell committed Sep 20, 2024
1 parent 635de3c commit 4c0a3a2
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions tests/testdata/blast_single_resistance.txt
Original file line number Diff line number Diff line change
Expand Up @@ -66,7 +66,7 @@ blaOXA-535_1_KX828709 minus NODE_65_length_2231_cov_99.410745 blaOXA-535_1_KX828
blaOXA-436_1_KT959105 minus NODE_65_length_2231_cov_99.410745 blaOXA-436_1_KT959105 84.481 0.0 787 1409 2206 798 1 799
# BLASTN 2.12.0+
# Query: NODE_13_length_813_cov_66.2018
# Database: /home/proj/stage/microbial/references/resistances/beta-lactam
# Database: /tmp/beta-lactam
# Fields: subject title, subject strand, query acc.ver, subject acc.ver, % identity, evalue, bit score, q. start, q. end, s. start, s. end, alignment length
# 25 hits found
blaVIM-57_1_MH450217 plus NODE_13_length_813_cov_66.2018 blaVIM-57_1_MH450217 100.000 1.03e-19 93.5 764 813 1 50 50
Expand Down Expand Up @@ -96,7 +96,7 @@ blaVIM-1_1_Y18050 plus NODE_13_length_813_cov_66.2018 blaVIM-1_1_Y18050 100.000
blaVIM-38_1_KC469971 plus NODE_13_length_813_cov_66.2018 blaVIM-38_1_KC469971 96.000 2.22e-16 82.4 764 813 1 50 50
# BLASTN 2.12.0+
# Query: NODE_38_length_14835_cov_85.885
# Database: /home/proj/stage/microbial/references/resistances/beta-lactam
# Database: /tmp/beta-lactam
# Fields: subject title, subject strand, query acc.ver, subject acc.ver, % identity, evalue, bit score, q. start, q. end, s. start, s. end, alignment length
# 53 hits found
blaVIM-4_1_EU581706 minus NODE_38_length_14835_cov_85.885 blaVIM-4_1_EU581706 99.875 0.0 1474 11925 12725 801 1 801
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