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Hello there!
We need frequency and count data for each exported variant cluster.
These numbers need ot be stored in the INFO field as two separate keys, such as
AF=0.4 (frequency)
AC=1234 (count)
Next run SVDB like this
svdb --query --query_vcf input.vcf --db exported_loqus_vcf.vcf --input_hits AC --input_frq AF
Good luck!
The text was updated successfully, but these errors were encountered:
Hello there!
We need frequency and count data for each exported variant cluster.
These numbers need ot be stored in the INFO field as two separate keys, such as
AF=0.4 (frequency)
AC=1234 (count)
Next run SVDB like this
svdb --query --query_vcf input.vcf --db exported_loqus_vcf.vcf --input_hits AC --input_frq AF
Good luck!
The text was updated successfully, but these errors were encountered: