SPAMsc (Spatial Projection of PAired Modalities in Single-Cell Multiomics) is a comprehensive workflow designed to project multi-modal single-cell data onto high-resolution spatial transcriptomic data and identify spatial features.
library(devtools)
install_github('ChloeHJ/spamsc')
library(spamsc)
library(Signac)
The vignettes for spamsc can be found here: https://drive.google.com/drive/folders/1yqUU0iDTktuYh5Ru5Zu1fbhXVb_ttvjU?usp=drive_link
And accompanying datasets here: https://drive.google.com/drive/folders/1vKKqyQDa7H7bxo-kBp4lij_Lo4gYj8Da?usp=drive_link