This project is an extension of Chaste that is intended to be used for simulation of drug action in cardiac electrophysiology models.
Before using this code you will need to download and install Chaste's dependencies and the Chaste source code itself.
Please see Getting Started for details of how to do this (follow instructions for "Development Code User" to keep up to date with the latest code, or a release version if you want longer-term stability).
This repo must be cloned into
<chaste source directory>/projects/ApPredictso that all the file paths can be picked up correctly (replacing <chaste source directory> with the place you have put the Chaste source code). Alternatively, you can put a sim link from the above folder to wherever you clone this repo.
This ApPredict project should be used with the current develop branch of Chaste. If instead you want a version that works with a released version of Chaste, then please select the relevant Tag of this github repository.
The following instructions should do the cloning, note that this project pulls in a submodule from the Chaste/cellml repository, so cloning it requires the --recursive option:
$ cd <chaste source directory>/projects
$ git clone --recursive https://github.com/Chaste/ApPredict.gitN.B. on really old git versions (<1.6.5), --recursive doesn't work and you need to do:
$ cd <chaste source directory>/projects
$ git clone https://github.com/Chaste/ApPredict.git
$ cd ApPredict
$ git submodule init
$ git submodule update