From 85082b2cfaa9745680399fed91a9323fdd179bb0 Mon Sep 17 00:00:00 2001 From: ogeokp143 <159848550+ogeokp143@users.noreply.github.com> Date: Wed, 28 Aug 2024 15:47:43 -0700 Subject: [PATCH 1/7] Update 2023-12-24_gilbertson_biorxiv.md Bolded Capra JA --- _publications/2023-12-24_gilbertson_biorxiv.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/_publications/2023-12-24_gilbertson_biorxiv.md b/_publications/2023-12-24_gilbertson_biorxiv.md index b3ecb460c..958e72973 100644 --- a/_publications/2023-12-24_gilbertson_biorxiv.md +++ b/_publications/2023-12-24_gilbertson_biorxiv.md @@ -1,6 +1,6 @@ --- title: "Machine learning reveals the diversity of human 3D chromatin contact patterns" -authors: "**Erin N. Gilbertson**, Colin M. Brand, Evonne McArthur, David C. Rinker, Shuzhen Kuang, Katherine S. Pollard, John A. Capra*" +authors: "**Erin N. Gilbertson**, Colin M. Brand, Evonne McArthur, David C. Rinker, Shuzhen Kuang, Katherine S. Pollard, **John A. Capra***" journal: "bioRxiv" pub_date: "" #Date of journal publication, NOT BIORXIV UPLOAD image: "/static/img/pub/2023-12-24_gilbertson_biorxiv.png" #Minimum dimensions of From 803cceadaa5e657c1e80cdbbe14e3825c9bb3bf5 Mon Sep 17 00:00:00 2001 From: ogeokp143 <159848550+ogeokp143@users.noreply.github.com> Date: Thu, 29 Aug 2024 10:19:18 -0700 Subject: [PATCH 2/7] Update 2016-02-12_simonti_science.md --- _publications/2016-02-12_simonti_science.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/_publications/2016-02-12_simonti_science.md b/_publications/2016-02-12_simonti_science.md index 84dbb6b4d..895110867 100644 --- a/_publications/2016-02-12_simonti_science.md +++ b/_publications/2016-02-12_simonti_science.md @@ -4,7 +4,7 @@ authors: "**Corinne N. Simonti**, Benjamin Vernot, Lisa Bastarache, Erwin Bottin David S. Carrell, Rex L. Chisholm, David R. Crosslin, Scott J. Hebbring, Gail P. Jarvik, Iftikhar J. Kullo, Rongling Li, Jyotishman Pathak, Marylyn D. Ritchie, Dan M. Roden, Shefali S. Verma, Gerard Tromp, -Jeffrey D. Prato, William S. Bush, Joshua M. Akey, Joshua C. Denny, John A. Capra" +Jeffrey D. Prato, William S. Bush, Joshua M. Akey, Joshua C. Denny, **John A. Capra**" journal: "Science" pub_date: "2016-02-12" #Date of journal publication, NOT BIORXIV UPLOAD image: "/static/img/pub/2016-02-12_simonti_science.png" #Minimum dimensions of From 5d5a187f7a218de2800cf7c9be451f45964a21ff Mon Sep 17 00:00:00 2001 From: ogeokp143 <159848550+ogeokp143@users.noreply.github.com> Date: Thu, 29 Aug 2024 10:20:40 -0700 Subject: [PATCH 3/7] Update 2021-05-10_fong_mbe.md Bolded Capra in author's list --- _publications/2021-05-10_fong_mbe.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/_publications/2021-05-10_fong_mbe.md b/_publications/2021-05-10_fong_mbe.md index 04930d996..463cac1f7 100644 --- a/_publications/2021-05-10_fong_mbe.md +++ b/_publications/2021-05-10_fong_mbe.md @@ -1,6 +1,6 @@ --- title: "Modeling the Evolutionary Architectures of Transcribed Human Enhancer Sequences Reveals Distinct Origins, Functions, and Associations with Human Trait Variation" -authors: "**Sarah L. Fong**, John A. Capra*" +authors: "**Sarah L. Fong**, **John A. Capra***" journal: "Molecular Biology and Evolution" pub_date: "2021-05-10" #Date of journal publication, NOT BIORXIV UPLOAD image: "/static/img/pub/2021-05-10_fong_mbe.png" #Minimum dimensions of From 2641332030e2b5c2759e25e4a5a9053be30d31d0 Mon Sep 17 00:00:00 2001 From: ogeokp143 <159848550+ogeokp143@users.noreply.github.com> Date: Thu, 29 Aug 2024 10:21:44 -0700 Subject: [PATCH 4/7] Update 2021-09-15_li_biorxiv.md Bolded Capra in authors list --- _publications/2021-09-15_li_biorxiv.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/_publications/2021-09-15_li_biorxiv.md b/_publications/2021-09-15_li_biorxiv.md index 6d0dcfd11..dd776e018 100644 --- a/_publications/2021-09-15_li_biorxiv.md +++ b/_publications/2021-09-15_li_biorxiv.md @@ -1,6 +1,6 @@ --- title: "The 3D spatial constraint on 6.1 million amino acid sites in the human proteome" -authors: "**Bian Li**, Dan M. Roden, John A. Capra" +authors: "**Bian Li**, Dan M. Roden, **John A. Capra**" journal: "bioRxiv" pub_date: "" #Date of journal publication, NOT BIORXIV UPLOAD image: "/static/img/pub/2021-09-15_li_biorxiv.png" #Minimum dimensions of @@ -12,4 +12,4 @@ github: links: - name: "COSMIS app" url: "http://cosmis-app.herokuapp.com/" ---- \ No newline at end of file +--- From 76ccb7a28edb62ac0da18d10f33008c21c302818 Mon Sep 17 00:00:00 2001 From: ogeokp143 <159848550+ogeokp143@users.noreply.github.com> Date: Thu, 29 Aug 2024 10:22:45 -0700 Subject: [PATCH 5/7] Update 2021-10-07_mukherjee_ajhg.md Bolded Capra in authors list --- _publications/2021-10-07_mukherjee_ajhg.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/_publications/2021-10-07_mukherjee_ajhg.md b/_publications/2021-10-07_mukherjee_ajhg.md index 439989e60..9d758c7a1 100644 --- a/_publications/2021-10-07_mukherjee_ajhg.md +++ b/_publications/2021-10-07_mukherjee_ajhg.md @@ -1,7 +1,7 @@ --- title: "Identifying digenic disease genes via machine learning in the Undiagnosed Diseases Network" authors: "**Souhrid Mukherjee**, Joy D Cogan, John H Newman, John A Phillips III, Rizwan Hamid, -Undiagnosed Diseases Network, Jens Meiler*, John A. Capra*" +Undiagnosed Diseases Network, Jens Meiler*, **John A. Capra***" journal: "American Journal of Human Genetics (AJHG)" pub_date: "2021-10-07" image: "/static/img/pub/2021-10-07_mukherjee_ajhg.png" From 6896a18351971ca486ac3c6a6953dd25f4087044 Mon Sep 17 00:00:00 2001 From: ogeokp143 <159848550+ogeokp143@users.noreply.github.com> Date: Thu, 29 Aug 2024 10:23:41 -0700 Subject: [PATCH 6/7] Update 2022-04-09_brand.md Bolded Capra in authors list --- _publications/2022-04-09_brand.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/_publications/2022-04-09_brand.md b/_publications/2022-04-09_brand.md index fc4181552..c899677bf 100644 --- a/_publications/2022-04-09_brand.md +++ b/_publications/2022-04-09_brand.md @@ -1,6 +1,6 @@ --- title: "Predicting archaic hominin phenotypes from genomic data" -authors: "**Colin M. Brand**, Laura C. Colbran, John A. Capra" +authors: "**Colin M. Brand**, Laura C. Colbran, **John A. Capra**" journal: "Annual Review of Genetics and Human Genomics" pub_date: "2022-04-09" image: "/static/img/pub/2022-04-09_brand.png" From 7dc6b29f1c2a434a3721490802f9ab57b876acdd Mon Sep 17 00:00:00 2001 From: ogeokp143 <159848550+ogeokp143@users.noreply.github.com> Date: Thu, 29 Aug 2024 10:24:37 -0700 Subject: [PATCH 7/7] Update 2023-05-04_brand_nat-ee.md Bolded Capra in author list --- _publications/2023-05-04_brand_nat-ee.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/_publications/2023-05-04_brand_nat-ee.md b/_publications/2023-05-04_brand_nat-ee.md index 0527ca0b8..091a040bb 100644 --- a/_publications/2023-05-04_brand_nat-ee.md +++ b/_publications/2023-05-04_brand_nat-ee.md @@ -1,6 +1,6 @@ --- title: "Resurrecting the alternative splicing landscape of archaic hominins using machine learning" -authors: "**Colin M. Brand**, Laura C. Colbran, John A. Capra" +authors: "**Colin M. Brand**, Laura C. Colbran, **John A. Capra**" journal: "Nature Ecology & Evolution" image: "/static/img/pub/2023-05-04_brand_nat-ee.png" biorxiv_version: "2022.08.02.502533v3"