Temporarily limit anndata version to < 0.11.0

CSOgroup · Nov 7, 2024 · 0edcae0 · 0edcae0
1 parent 49ac45a
commit 0edcae0
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Showing 2 changed files with 1 addition and 2 deletions.
diff --git a/pyproject.toml b/pyproject.toml
@@ -25,7 +25,7 @@ urls.Documentation = "https://cellcharter.readthedocs.io/"
 urls.Source = "https://github.com/CSOgroup/cellcharter"
 urls.Home-page = "https://github.com/CSOgroup/cellcharter"
 dependencies = [
-    "anndata",
+    "anndata < 0.11.0",
     "scikit-learn",
     "squidpy",
     "torchgmm",

diff --git a/src/cellcharter/gr/_nhood.py b/src/cellcharter/gr/_nhood.py
@@ -395,7 +395,6 @@ def diff_nhood_enrichment(
     %(copy)s
     nhood_kwargs
         Keyword arguments for :func:`gr.nhood_enrichment`. The following arguments are not allowed:
-            - ``'observed_expected'``
             - ``n_perms``
             - ``pvalues``
             - ``n_jobs``