fix: Specify source type for readthedocs #103
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| name: CI | |
| on: | |
| pull_request: | |
| push: | |
| branches: [main] | |
| tags: ['v*'] | |
| jobs: | |
| mypy: | |
| if: ${{ !github.event.pull_request.draft }} | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check out repository | |
| uses: actions/checkout@v4 | |
| - uses: ./.github/actions/setup | |
| - name: mypy | |
| run: make mypy | |
| pre-commit: | |
| if: ${{ !github.event.pull_request.draft }} | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check out repository | |
| uses: actions/checkout@v4 | |
| - uses: ./.github/actions/setup | |
| - name: pre-commit | |
| run: make pre-commit | |
| docs: | |
| if: ${{ !github.event.pull_request.draft }} | |
| runs-on: ubuntu-latest | |
| env: | |
| REF_DATA_ROOT: ${{ github.workspace }}/.esgpull/data | |
| REF_OUTPUT_ROOT: ${{ github.workspace }}/out | |
| REF_DATABASE_URL: "sqlite:///${{ github.workspace }}/.ref/db/ref.db" | |
| steps: | |
| - name: Check out repository | |
| uses: actions/checkout@v4 | |
| - uses: ./.github/actions/setup | |
| - name: Cache test data | |
| id: cache-test-data | |
| uses: actions/cache@v4 | |
| with: | |
| path: .esgpull | |
| key: test-data-${{ hashFiles('scripts/fetch_test_data.py') }} | |
| - if: ${{ steps.cache-test-data.outputs.cache-hit != 'true' }} | |
| run: | | |
| echo "Rerun after cache generation in tests job" | |
| exit 1 | |
| - name: docs | |
| run: | | |
| mkdir -p ${{ github.workspace }}/.ref/db | |
| uv run ref ingest --source-type cmip6 .esgpull/data | |
| uv run mkdocs build --strict | |
| tests: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ "ubuntu-latest" ] | |
| python-version: [ "3.10", "3.11", "3.12", "3.13" ] | |
| runs-on: "${{ matrix.os }}" | |
| defaults: | |
| run: | |
| # This might be needed for Windows and doesn't seem to affect unix-based systems | |
| # so we include it. If you have better proof of whether this is needed or not, | |
| # feel free to update. | |
| shell: bash | |
| steps: | |
| - name: Check out repository | |
| uses: actions/checkout@v4 | |
| - uses: ./.github/actions/setup | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| # Share a cache of test data across all test jobs | |
| - name: Cache test data | |
| id: cache-test-data | |
| uses: actions/cache@v4 | |
| with: | |
| path: .esgpull | |
| key: test-data-${{ hashFiles('scripts/fetch_test_data.py') }} | |
| - name: Install esgpull | |
| run: | | |
| uv run esgpull self install .esgpull || uv run esgpull self choose .esgpull | |
| - if: ${{ steps.cache-test-data.outputs.cache-hit != 'true' }} | |
| name: Fetch the test data | |
| run: | | |
| uv run esgpull config api.index_node esgf-node.llnl.gov | |
| make fetch-test-data | |
| - name: Run tests | |
| run: | | |
| uv run --package ref pytest packages/ref -r a -v --doctest-modules --cov=packages/ref/src --cov-report=term | |
| uv run --package ref-core pytest packages/ref-core -r a -v --doctest-modules --cov=packages/ref-core/src --cov-report=term | |
| uv run --package ref-metrics-example pytest packages/ref-metrics-example -r a -v --doctest-modules --cov=packages/ref-metrics-example/src --cov-report=term --cov-append | |
| uv run coverage xml | |
| # Run integration tests (without adding to the coverage) | |
| uv run pytest tests -r a -v | |
| - name: Upload coverage reports to Codecov with GitHub Action | |
| uses: codecov/codecov-action@v4.2.0 | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} | |
| imports-without-extras: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ "ubuntu-latest" ] | |
| python-version: [ "3.10", "3.11", "3.12", "3.13" ] | |
| runs-on: "${{ matrix.os }}" | |
| steps: | |
| - name: Check out repository | |
| uses: actions/checkout@v4 | |
| - uses: ./.github/actions/setup | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Check importable without extras | |
| run: uv run --package ref-core python scripts/test-install.py | |
| # Check if a changelog message was added to the PR | |
| # Only runs on pull requests | |
| check-for-changelog: | |
| runs-on: ubuntu-latest | |
| if: github.event.pull_request | |
| steps: | |
| - name: Check out repository | |
| uses: actions/checkout@v4 | |
| - uses: ./.github/actions/setup | |
| - name: Get all changelog files | |
| id: changed-changelog-files | |
| uses: tj-actions/changed-files@v45 | |
| with: | |
| # Avoid using single or double quotes for multiline patterns | |
| files: | | |
| changelog/*.md | |
| - name: Print out the changed files | |
| if: steps.changed-files-specific.outputs.any_changed == 'true' | |
| env: | |
| ALL_CHANGED_FILES: ${{ steps.changed-changelog-files.outputs.all_changed_files }} | |
| run: | | |
| make changelog-draft | |
| - name: Fail if no changelog message is present | |
| if: steps.changed-changelog-files.outputs.any_changed == 'false' | |
| run: | | |
| echo "No changelog present." | |
| exit 1 |