Update bgc namelist to remove some coupled settings.

Update a few bgc test to increase diagnostics.
CICE-Consortium · Aug 15, 2024 · 4ecfd8c · 4ecfd8c
1 parent 5486d3f
commit 4ecfd8c
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Showing 6 changed files with 19 additions and 27 deletions.
diff --git a/configuration/scripts/ice_in b/configuration/scripts/ice_in
@@ -348,6 +348,7 @@
     tr_bgc_DON      = .false.
     tr_bgc_Fe       = .false. 
     grid_o          = 0.006
+    grid_o_t        = 0.006
     l_sk            = 20.0
     grid_oS         = 0.0
     l_skS           = 0.028
@@ -429,7 +430,7 @@
     fr_graze_s         = 0.5
     fr_graze_e         = 0.5
     fr_mort2min        = 0.9
-    fr_dFe             = 0.9
+    fr_dFe             = 1.0
     k_nitrif           = 0.046
     t_iron_conv        = 3065.0
     max_loss           = 0.9
@@ -440,7 +441,7 @@
     t_sk_ox            = 12.0
     algaltype_diatoms  = 0.0
     algaltype_sp       = 0.0
-    algaltype_phaeo    = 0.5
+    algaltype_phaeo    = 0.0
     nitratetype        = -1.0
     ammoniumtype       = 0.0
     silicatetype       = -1.0
@@ -452,12 +453,12 @@
     dontype_protein    = 0.0
     fedtype_1          = 0.0
     feptype_1          = 0.5
-    zaerotype_bc1      = 0.0
-    zaerotype_bc2      = 0.0
-    zaerotype_dust1    = 0.0
-    zaerotype_dust2    = 0.0
-    zaerotype_dust3    = 0.0
-    zaerotype_dust4    = 0.0
+    zaerotype_bc1      = -1.0
+    zaerotype_bc2      = -1.0
+    zaerotype_dust1    = -1.0
+    zaerotype_dust2    = -1.0
+    zaerotype_dust3    = -1.0
+    zaerotype_dust4    = -1.0
     ratio_C2N_diatoms  = 7.0
     ratio_C2N_sp       = 7.0
     ratio_C2N_phaeo    = 7.0

diff --git a/configuration/scripts/options/set_nml.bgcz b/configuration/scripts/options/set_nml.bgcz
@@ -26,9 +26,6 @@ tr_bgc_Fe       = .true.
 # modal_aero      = .true.
 # dEdd_algae      = .true.
 tfrz_option     = 'mushy'
-highfreq        = .true.
-natmiter        = 10
-oceanmixed_ice  = .false.
 #
 nslyr           = 5
 tr_snow         = .true.

diff --git a/configuration/scripts/options/set_nml.bgczclim b/configuration/scripts/options/set_nml.bgczclim
@@ -30,9 +30,6 @@ tr_bgc_Fe       = .true.
 # modal_aero      = .true.
 # dEdd_algae      = .true.
 tfrz_option     = 'mushy'
-highfreq        = .true.
-natmiter        = 10
-oceanmixed_ice  = .false.
 bgc_data_type   = 'clim'
 #
 nslyr           = 5

diff --git a/configuration/scripts/options/set_nml.bgczm b/configuration/scripts/options/set_nml.bgczm
@@ -26,9 +26,6 @@ tr_bgc_Fe       = .true.
 modal_aero      = .true.
 # dEdd_algae      = .true.
 tfrz_option     = 'mushy'
-highfreq        = .true.
-natmiter        = 10
-oceanmixed_ice  = .false.
 #
 nslyr           = 5
 tr_snow         = .true.

diff --git a/configuration/scripts/options/set_nml.e3smbgc b/configuration/scripts/options/set_nml.e3smbgc
@@ -50,7 +50,7 @@ f_don_Am_protein = 1.0
 f_doc_s = 0.5
 f_doc_l = 0.5
 fr_mort2min = 0.9
-fr_dFe = 0.9
+fr_dFe = 1.0
 k_nitrif = 0.046
 fr_resp_s = 0.9
 y_sk_DMS = 0.7
@@ -64,11 +64,11 @@ doctype_s = 0.0
 doctype_l = 0.0
 dontype_protein = 0.0
 fedtype_1 = 0.0
-zaerotype_bc1 = 0.0
-zaerotype_bc2 = 0.0
-zaerotype_dust1 = 0.0
-zaerotype_dust2 = 0.0
-zaerotype_dust3 = 0.0
-zaerotype_dust4 = 0.0
+zaerotype_bc1 = -1.0
+zaerotype_bc2 = -1.0
+zaerotype_dust1 = -1.0
+zaerotype_dust2 = -1.0
+zaerotype_dust3 = -1.0
+zaerotype_dust4 = -1.0
 ratio_C2N_proteins = 5.0
 
diff --git a/configuration/scripts/tests/base_suite.ts b/configuration/scripts/tests/base_suite.ts
@@ -54,10 +54,10 @@ restart        gbox80  1x1        box2001
 smoke          gbox80  1x1        boxslotcyl
 smoke          gbox12  1x1x12x12x1  boxchan,diag1,debug
 restart        gx3     8x2        modal
-smoke          gx3     8x2        bgcz
+smoke          gx3     8x2        bgcz,diag1,run5day
 smoke          gx3     8x2        jra55do
-smoke          gx3     8x2        bgczm,debug
-smoke          gx3     8x1        bgcskl,debug
+smoke          gx3     8x2        bgczm,diag1,debug
+smoke          gx3     8x1        bgcskl,diag1,debug
 #smoke          gx3     4x1       bgcz,thread        smoke_gx3_8x2_bgcz
 restart        gx1     4x2        bgcsklclim,medium
 restart        gx1     8x1        bgczclim,medium