- Task: stimulus code. Requirements: Psychtoolbox 3.0
- Protocol_definition: response (keypress and saccade) analysis to define the protocol (triggers and durations) and use it in the GLM. Requirements: edfImport
- MRI_processing_pipeline: MRI data processing using SPM and FSL. Requirements: SPM12, FSL, and PhysIO toolbox, NIfTI_tools.
- linear_mixed_models: code for generating the data needed for the linear mixed-effects modeling. We computed the single-response percent signal change to use it as output variable. Requirements: SPM12.
- CONN: functional connectivity analysis using the CONN toolbox. Requirements: CONN21a.