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19 Open 40 Closed
19 Open 40 Closed
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Issues list

remove unwanted macs2 large files ASPEN RepoName enhancement New feature or request
#85 opened Apr 15, 2025 by kopardev 2025-04
@kopardev
check consensus ASPEN RepoName documentation Improvements or additions to documentation
#84 opened Apr 15, 2025 by kopardev 2025-04
@kopardev
More ChIPSeeker annotations ASPEN RepoName enhancement New feature or request
#79 opened Feb 27, 2025 by kopardev
2 of 3 tasks
2025-03
@kopardev
1
Check if number of replicates > 1 per sample in contrast ASPEN RepoName enhancement New feature or request
#76 opened Feb 27, 2025 by kopardev 2025-03
@kopardev
1
Comments/Suggestions about documentation ASPEN RepoName
#75 opened Feb 27, 2025 by kopardev 2025-03
@kopardev
SINGULARITY CACHE DIR sing file names ASPEN RepoName bug Something isn't working
#70 opened Feb 24, 2025 by kopardev
@kopardev
1
compute scaling factors from aligned spike-in reads ASPEN RepoName
#69 opened Feb 24, 2025 by kopardev 2025-02
@kopardev
1
Create updated DEGs with normalized counts matrix ASPEN RepoName
#68 opened Feb 24, 2025 by kopardev 2025-02
@kopardev
create normalized counts matrix ASPEN RepoName
#67 opened Feb 24, 2025 by kopardev 2025-02
@kopardev
Create chromVar docker ASPEN RepoName
#65 opened Feb 24, 2025 by kopardev 2025-03
@kopardev
1
add chromvar ASPEN RepoName enhancement New feature or request
#64 opened Feb 24, 2025 by kopardev 2025-03
@kopardev
1
add ataqv support ASPEN RepoName enhancement New feature or request
#63 opened Feb 24, 2025 by kopardev
@kopardev
1
create normalized tn5 counts files ASPEN RepoName
#62 opened Feb 14, 2025 by kopardev 2025-02
@kopardev
2
Add spike-in normalization support ASPEN RepoName enhancement New feature or request
#45 opened Feb 11, 2025 by kopardev 2025-04
@kopardev
Check if jobby running correctly. ASPEN RepoName
#32 opened Feb 7, 2024 by kopardev
@kopardev
Need to add single-end option ASPEN RepoName enhancement New feature or request
#31 opened Feb 1, 2024 by slsevilla
1
warning during git clone: large files should be handled with git lfs ASPEN RepoName
#25 opened Jan 9, 2024 by kelly-sovacool
@kopardev
4
"consensus" peaks are generated even when samples have only 1 replicate ASPEN RepoName
#21 opened Nov 22, 2023 by kopardev
@kopardev
ASAP: Deeptools peaks ASPEN RepoName enhancement New feature or request MediumPriority
#7 opened Dec 8, 2022 by kopardev
2 tasks
@kopardev
ProTip! Updated in the last three days: updated:>2025-04-14.