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Repositories
- spineFE-benchmark Public
Code and instructions to reproduce the analyses from our study comparing linear and nonlinear finite element models of vertebral strength across the thoracic and lumbar spine using the VERSE19 dataset. Includes image data, results and visualization scripts to support full reproducibility.
- HR-pQCT-Segmentation Public
- bonelab.github.io Public
- HRpQCT-Knee-Seg Public
this repo contains an installable package for doing automated HR-pQCT knee segmentation
- BML-MRI-segmentation Public
- hrpqct-knee-segmentation Public
Scripts for training and testing models with the goal of automating knee contouring. Depends on `bonelab-pytorch-lightning`
- bonelab-pytorch-lightning Public
Tasks, dataset components, loss functions, and utilities for using pytorch lightning for deep learning with medical image data.
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