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Processing /gpfs/bbp.cscs.ch/project/proj83/tharayil/generationCode/BlueRecording
Installing build dependencies: started
Installing build dependencies: finished with status 'done'
Getting requirements to build wheel: started
Getting requirements to build wheel: finished with status 'done'
Preparing metadata (pyproject.toml): started
Preparing metadata (pyproject.toml): finished with status 'done'
Collecting connectome-utilities@ git+https://github.com/BlueBrain/ConnectomeUtilities.git#egg=connectome-utilities (from bluerecording==0.2.0)
Cloning https://github.com/BlueBrain/ConnectomeUtilities.git to /tmp/pip-install-px7hbm5e/connectome-utilities_74c18a17646d443eb4465d6961d86940
Resolved https://github.com/BlueBrain/ConnectomeUtilities.git to commit 01e1ecb887afcfa4bc39a657731a2857bea840bf
Installing build dependencies: started
Installing build dependencies: finished with status 'done'
Getting requirements to build wheel: started
Getting requirements to build wheel: finished with status 'done'
Preparing metadata (pyproject.toml): started
Preparing metadata (pyproject.toml): finished with status 'done'
Collecting cinplaAnalysis@ git+https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis (from bluerecording==0.2.0)
Cloning https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis to /tmp/pip-install-px7hbm5e/cinplaanalysis_8eb28b2b92c449318c491c5d6197d68d
Resolved https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis to commit 6baa98a6d2f3b914b4e63894101ef4f92769a6eb
Installing build dependencies: started
Installing build dependencies: finished with status 'done'
Getting requirements to build wheel: started
Getting requirements to build wheel: finished with status 'done'
Preparing metadata (pyproject.toml): started
Preparing metadata (pyproject.toml): finished with status 'done'
Collecting bluepysnap (from bluerecording==0.2.0)
Using cached bluepysnap-3.0.1-py3-none-any.whl
Collecting libsonata>=0.1.28 (from bluerecording==0.2.0)
Obtaining dependency information for libsonata>=0.1.28 from https://files.pythonhosted.org/packages/e8/19/d7803958a014ad38c44635349a2f6e9786dbd37ac906d7852f08d0b5191d/libsonata-0.1.28-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata
Using cached libsonata-0.1.28-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (13 kB)
Collecting scikit-learn (from bluerecording==0.2.0)
Obtaining dependency information for scikit-learn from https://files.pythonhosted.org/packages/32/63/ed228892adad313aab0d0f9261241e7bf1efe36730a2788ad424bcad00ca/scikit_learn-1.5.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata
Using cached scikit_learn-1.5.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (12 kB)
Collecting voxcell (from bluerecording==0.2.0)
Using cached voxcell-3.1.9-py3-none-any.whl
Requirement already satisfied: scipy in /gpfs/bbp.cscs.ch/ssd/apps/bsd/2024-02-01/stage_applications/install_gcc-12.3.0-skylake/py-scipy-1.11.3-dhxei7/lib/python3.11/site-packages (from bluerecording==0.2.0) (1.11.3)
Requirement already satisfied: numpy in /gpfs/bbp.cscs.ch/ssd/apps/bsd/2024-02-01/stage_applications/install_gcc-12.3.0-skylake/py-numpy-1.26.1-elr5pn/lib/python3.11/site-packages (from bluerecording==0.2.0) (1.26.1)
Requirement already satisfied: pandas in /gpfs/bbp.cscs.ch/ssd/apps/bsd/2024-02-01/stage_applications/install_gcc-12.3.0-skylake/py-pandas-1.5.3-utuy7a/lib/python3.11/site-packages (from bluerecording==0.2.0) (1.5.3)
Collecting morphio<3.3.7 (from bluerecording==0.2.0)
Obtaining dependency information for morphio<3.3.7 from https://files.pythonhosted.org/packages/ea/49/c75ab2d950f41bac144de7763c5f74c5ee14c69ed6f8f772898bd8ae257f/MorphIO-3.3.6-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata
Using cached MorphIO-3.3.6-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.5 kB)
Collecting notebook (from bluerecording==0.2.0)
Obtaining dependency information for notebook from https://files.pythonhosted.org/packages/32/b4/b0cdaf52c35a3a40633136bee5152d6670acb555c698d23a3458dca65781/notebook-7.2.1-py3-none-any.whl.metadata
Using cached notebook-7.2.1-py3-none-any.whl.metadata (10 kB)
Collecting ipython (from bluerecording==0.2.0)
Obtaining dependency information for ipython from https://files.pythonhosted.org/packages/73/48/4d2818054671bb272d1b12ca65748a4145dc602a463683b5c21b260becee/ipython-8.26.0-py3-none-any.whl.metadata
Using cached ipython-8.26.0-py3-none-any.whl.metadata (5.0 kB)
Requirement already satisfied: matplotlib in /gpfs/bbp.cscs.ch/ssd/apps/bsd/2024-02-01/stage_applications/install_gcc-12.3.0-skylake/py-matplotlib-3.8.1-bmj72a/lib/python3.11/site-packages (from bluerecording==0.2.0) (3.8.1)
Collecting MEAutility (from bluerecording==0.2.0)
Obtaining dependency information for MEAutility from https://files.pythonhosted.org/packages/c6/20/de3443888225574e1e42675e8d740f6cecc5873a6da7640b2c798e22fc81/MEAutility-1.5.1-py3-none-any.whl.metadata
Using cached MEAutility-1.5.1-py3-none-any.whl.metadata (1.5 kB)
Collecting neuron (from bluerecording==0.2.0)
Obtaining dependency information for neuron from https://files.pythonhosted.org/packages/0e/dd/b0001b3666c5cf91cac6f373933995ee4605fb814e5342420bc637d5a097/NEURON-8.2.6-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata
Using cached NEURON-8.2.6-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.7 kB)
Collecting pytest-cov (from bluerecording==0.2.0)
Obtaining dependency information for pytest-cov from https://files.pythonhosted.org/packages/78/3a/af5b4fa5961d9a1e6237b530eb87dd04aea6eb83da09d2a4073d81b54ccf/pytest_cov-5.0.0-py3-none-any.whl.metadata
Using cached pytest_cov-5.0.0-py3-none-any.whl.metadata (27 kB)
Collecting ipympl (from bluerecording==0.2.0)
Obtaining dependency information for ipympl from https://files.pythonhosted.org/packages/d8/50/d6f4e7eb0e7d198b431d8259bc9a6035f879d4df487448b196cdf1e84155/ipympl-0.9.4-py3-none-any.whl.metadata
Using cached ipympl-0.9.4-py3-none-any.whl.metadata (8.7 kB)
Collecting neo (from bluerecording==0.2.0)
Obtaining dependency information for neo from https://files.pythonhosted.org/packages/e3/8b/1edaec25b47911be54c2e8c8da53c2bcedc883f64f50c664d75f5c47f4ed/neo-0.13.2-py3-none-any.whl.metadata
Using cached neo-0.13.2-py3-none-any.whl.metadata (8.8 kB)
Collecting xarray (from bluerecording==0.2.0)
Obtaining dependency information for xarray from https://files.pythonhosted.org/packages/45/95/233e1f9c939f5ba314297315df709e6a5e823bf3cade7211991b15aa65d2/xarray-2024.7.0-py3-none-any.whl.metadata
Using cached xarray-2024.7.0-py3-none-any.whl.metadata (11 kB)
Collecting cached-property>=1.0 (from bluepysnap->bluerecording==0.2.0)
Obtaining dependency information for cached-property>=1.0 from https://files.pythonhosted.org/packages/48/19/f2090f7dad41e225c7f2326e4cfe6fff49e57dedb5b53636c9551f86b069/cached_property-1.5.2-py2.py3-none-any.whl.metadata
Using cached cached_property-1.5.2-py2.py3-none-any.whl.metadata (11 kB)
Requirement already satisfied: h5py<4.0.0,>=3.0.1 in /gpfs/bbp.cscs.ch/ssd/apps/bsd/2024-02-01/stage_applications/install_gcc-12.3.0-skylake/py-h5py-3.8.0-5woxna/lib/python3.11/site-packages (from bluepysnap->bluerecording==0.2.0) (3.8.0)
Collecting importlib-resources>=5.0.0 (from bluepysnap->bluerecording==0.2.0)
Obtaining dependency information for importlib-resources>=5.0.0 from https://files.pythonhosted.org/packages/db/2a/728c8ae66011600fac5731a7db030d23c42f1321fd9547654f0c3b2b32d7/importlib_resources-6.4.4-py3-none-any.whl.metadata
Using cached importlib_resources-6.4.4-py3-none-any.whl.metadata (4.0 kB)
Collecting jsonschema<5.0.0,>=4.0.0 (from bluepysnap->bluerecording==0.2.0)
Obtaining dependency information for jsonschema<5.0.0,>=4.0.0 from https://files.pythonhosted.org/packages/69/4a/4f9dbeb84e8850557c02365a0eee0649abe5eb1d84af92a25731c6c0f922/jsonschema-4.23.0-py3-none-any.whl.metadata
Using cached jsonschema-4.23.0-py3-none-any.whl.metadata (7.9 kB)
Collecting morph-tool<3.0.0,>=2.4.3 (from bluepysnap->bluerecording==0.2.0)
Using cached morph_tool-2.11.0-py3-none-any.whl
Collecting click>=7.0 (from bluepysnap->bluerecording==0.2.0)
Obtaining dependency information for click>=7.0 from https://files.pythonhosted.org/packages/00/2e/d53fa4befbf2cfa713304affc7ca780ce4fc1fd8710527771b58311a3229/click-8.1.7-py3-none-any.whl.metadata
Using cached click-8.1.7-py3-none-any.whl.metadata (3.0 kB)
Collecting more-itertools>=8.2.0 (from bluepysnap->bluerecording==0.2.0)
Obtaining dependency information for more-itertools>=8.2.0 from https://files.pythonhosted.org/packages/d8/0b/6a51175e1395774449fca317fb8861379b7a2d59be411b8cce3d19d6ce78/more_itertools-10.4.0-py3-none-any.whl.metadata
Using cached more_itertools-10.4.0-py3-none-any.whl.metadata (36 kB)
Requirement already satisfied: python-dateutil>=2.8.1 in /gpfs/bbp.cscs.ch/ssd/apps/bsd/2024-02-01/stage_applications/install_gcc-12.3.0-skylake/py-python-dateutil-2.8.2-fcc6z5/lib/python3.11/site-packages (from pandas->bluerecording==0.2.0) (2.8.2)
Requirement already satisfied: pytz>=2020.1 in /gpfs/bbp.cscs.ch/ssd/apps/bsd/2024-02-01/stage_applications/install_gcc-12.3.0-skylake/py-pytz-2023.3-nr5mf4/lib/python3.11/site-packages (from pandas->bluerecording==0.2.0) (2023.3)
Collecting aiohttp (from cinplaAnalysis@ git+https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis->bluerecording==0.2.0)
Obtaining dependency information for aiohttp from https://files.pythonhosted.org/packages/2a/92/006690c31b830acbae09d2618e41308fe4c81c0679b3b33a3af859e0b7bf/aiohttp-3.10.5-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata
Using cached aiohttp-3.10.5-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (7.5 kB)
Collecting allensdk (from cinplaAnalysis@ git+https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis->bluerecording==0.2.0)
Obtaining dependency information for allensdk from https://files.pythonhosted.org/packages/ac/19/b8b4a1c61c7eca49f9233ce6b1d8b00b8efddba0915eda2a15e07b5e5332/allensdk-2.16.2-py3-none-any.whl.metadata
Using cached allensdk-2.16.2-py3-none-any.whl.metadata (1.9 kB)
Collecting appnope (from cinplaAnalysis@ git+https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis->bluerecording==0.2.0)
Obtaining dependency information for appnope from https://files.pythonhosted.org/packages/81/29/5ecc3a15d5a33e31b26c11426c45c501e439cb865d0bff96315d86443b78/appnope-0.1.4-py2.py3-none-any.whl.metadata
Using cached appnope-0.1.4-py2.py3-none-any.whl.metadata (908 bytes)
Collecting argon2-cffi (from cinplaAnalysis@ git+https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis->bluerecording==0.2.0)
Obtaining dependency information for argon2-cffi from https://files.pythonhosted.org/packages/a4/6a/e8a041599e78b6b3752da48000b14c8d1e8a04ded09c88c714ba047f34f5/argon2_cffi-23.1.0-py3-none-any.whl.metadata
Using cached argon2_cffi-23.1.0-py3-none-any.whl.metadata (5.2 kB)
Collecting argon2-cffi-bindings (from cinplaAnalysis@ git+https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis->bluerecording==0.2.0)
Obtaining dependency information for argon2-cffi-bindings from https://files.pythonhosted.org/packages/ec/f7/378254e6dd7ae6f31fe40c8649eea7d4832a42243acaf0f1fff9083b2bed/argon2_cffi_bindings-21.2.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata
Using cached argon2_cffi_bindings-21.2.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.7 kB)
Collecting argschema (from cinplaAnalysis@ git+https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis->bluerecording==0.2.0)
Using cached argschema-3.0.4-py2.py3-none-any.whl
Collecting async-timeout (from cinplaAnalysis@ git+https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis->bluerecording==0.2.0)
Obtaining dependency information for async-timeout from https://files.pythonhosted.org/packages/a7/fa/e01228c2938de91d47b307831c62ab9e4001e747789d0b05baf779a6488c/async_timeout-4.0.3-py3-none-any.whl.metadata
Using cached async_timeout-4.0.3-py3-none-any.whl.metadata (4.2 kB)
Collecting attrs (from cinplaAnalysis@ git+https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis->bluerecording==0.2.0)
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Collecting prometheus-client (from cinplaAnalysis@ git+https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis->bluerecording==0.2.0)
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Collecting pyzmq (from cinplaAnalysis@ git+https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis->bluerecording==0.2.0)
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Collecting requests-toolbelt (from cinplaAnalysis@ git+https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis->bluerecording==0.2.0)
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Collecting scikit-image (from cinplaAnalysis@ git+https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis->bluerecording==0.2.0)
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Collecting seaborn (from cinplaAnalysis@ git+https://github.com/joseph-tharayil/CINPLA_Allen_V1_analysis->bluerecording==0.2.0)
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Building wheels for collected packages: bluerecording, cinplaAnalysis, connectome-utilities, matplotlib
Building wheel for bluerecording (pyproject.toml): started
Building wheel for bluerecording (pyproject.toml): finished with status 'done'
Created wheel for bluerecording: filename=bluerecording-0.2.0-py3-none-any.whl size=17922 sha256=2cbbae7d7a646145da3c21c5655c451b9a4ddb0c59ea69fe8d2d0cd3c39a979a
Stored in directory: /tmp/pip-ephem-wheel-cache-_ms7bzc3/wheels/fc/24/24/17710d914d72525b9f67048889adca44d22644135ba2f24ecd
Building wheel for cinplaAnalysis (pyproject.toml): started
Building wheel for cinplaAnalysis (pyproject.toml): finished with status 'done'
Created wheel for cinplaAnalysis: filename=cinplaAnalysis-0.0.2-py3-none-any.whl size=16321 sha256=34df496d1af9aa7b30b7c47af2eba67b59cb04513be1825689674754b745ba19
Stored in directory: /tmp/pip-ephem-wheel-cache-_ms7bzc3/wheels/12/a6/93/a4bd9707371c856a4bb48fcdfeb010948e52b376cef9ed7d79
Building wheel for connectome-utilities (pyproject.toml): started
Building wheel for connectome-utilities (pyproject.toml): finished with status 'done'
Created wheel for connectome-utilities: filename=Connectome_Utilities-0.4.8-py3-none-any.whl size=91492 sha256=26fb8cb1bbab7ec0e9cf610f194bac3cf50fd7b79ea49e521cd3fae85897bff1
Stored in directory: /tmp/pip-ephem-wheel-cache-_ms7bzc3/wheels/f6/d4/a2/8a0289c4e089009247387ea0d1ae2b187bb39d865896665a47
Building wheel for matplotlib (pyproject.toml): started
Building wheel for matplotlib (pyproject.toml): finished with status 'error'
Successfully built bluerecording cinplaAnalysis connectome-utilities
Failed to build matplotlib