This repository containing all architectures considered in our analysis Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data.
Katarzyna Sidorczuk, Przemysław Gagat, Filip Pietluch, Jakub Kała, Dominik Rafacz, Laura Bąkała, Jadwiga Słowik, Rafał Kolenda, Stefan Rödiger, Legana C H W Fingerhut, Ira R Cooke, Paweł Mackiewicz, Michał Burdukiewicz, Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data, Briefings in Bioinformatics, 2022;, bbac343, https://doi.org/10.1093/bib/bbac343.
- https://github.com/BioGenies/NegativeDatasets: the repository containing the code necessary to reproduce results of our analysis.
- https://github.com/BioGenies/NegativeDatasetsArchitectures: the repository containing all architectures considered in our analysis.
- https://github.com/BioGenies/AMPBenchmark: the source code of AMPBenchmark.
If you have any questions, suggestions or comments, contact Michal Burdukiewicz.