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HPC documentation #349

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Update Singularity.md
UmarAbubacar authored Nov 8, 2023

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commit 287b495612be9d32d3fa542ad2f72a47ca141000
5 changes: 3 additions & 2 deletions doc/user_guide/Singularity.md
Original file line number Diff line number Diff line change
@@ -94,11 +94,12 @@ complex use cases.
## Exporting visualisations on HPC's
Some HPC systems may not allow users to export visualisations using the paraview exporter. To bypass this issue there are two options.

### Setting Paraview to work in a headless mode using the CMAKE flag

### Using xvfb
### Option 1: Using xvfb
Start a virtual frame buffer with:
```
/biodynamo/util/xvfb-initd.sh start
```
The buffer can be managed by the arguments ```start```|```stop```|```restart```

### Option 2: Setting Paraview to work in a headless mode using the CMAKE flag