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AshleyLab / risk_scores Public

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risk_scores

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subset_genetics_to_afib.sh

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executable file

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risk_scores

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subset_genetics_to_afib.sh

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executable file

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5 lines (3 loc) · 362 Bytes

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#!/bin/bash

plink2 --bfile /oak/stanford/groups/euan/projects/ukbb/data/genetic_data/v2/plink_small/ukb_imp_chr$1\_v2 --keep afib.cohort.training.txt --make-bed --out afib.cohort.train.$1

plink2 --bfile /oak/stanford/groups/euan/projects/ukbb/data/genetic_data/v2/plink_small/ukb_imp_chr$1\_v2 --keep afib.cohort.test.txt --make-bed --out afib.cohort.test.$1

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