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Error in step 9 and step 11 #66

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39652its opened this issue Jun 15, 2023 · 3 comments
Open

Error in step 9 and step 11 #66

39652its opened this issue Jun 15, 2023 · 3 comments

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@39652its
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Dear developer,

Thank you for your kind words and appreciation for this powerful tool.

In my research, I primarily utilize multiple 10x scRNA-seq data. However, there are two of my data, occuring the error and I could not fix it. I'd like to ask how I should do to fix these errors or the developer could gave me some advise.

This is the outcome of the first sample. The error occured in Step 11.
image

And this is the outcome of the second sample. The error occured in Step 9.
image

I would greatly appreciate your assistance in answering my questions and providing professional advice.

Sincerely

@AntonioDeFalco
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@39652its
For the error in the step 9, try to reduce the number of cores as reported previously #43 . For the error in step 11 it is the first time it has been encountered, since the warning refers to a parallel step try a lower number of cores also in this case, or otherwise let me know and I will try to resolve the error.

Regards.

@39652its
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39652its commented Jun 22, 2023

@AntonioDeFalco
Thanks for your quick reply!

The error in the step 9 had been resolved, thank you for your assistance.
However, the error in the step 11 after I tried to lower number of cores, there occured the new error message.
First, I tried to lower number of cores to par_cores =4.
截圖 2023-06-22 10 46 57

And Here is the the new error message.
截圖 2023-06-22 10 50 07

Is there any information I could provide to help resolve the error? I would greatly appreciate your assistance in answering my questions and providing professional advice.

Sincerely

@ddelitto
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image

I also get this error from one of our sarcoma samples.

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