Update Singularity images #30
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| name: Update Singularity images | |
| on: | |
| schedule: | |
| - cron: "0 0 * * *" | |
| workflow_dispatch: | |
| jobs: | |
| latest: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Run rsync job | |
| uses: appleboy/ssh-action@v0.1.7 | |
| with: | |
| host: gadi.nci.org.au | |
| username: ${{secrets.GADI_USER}} | |
| key: ${{secrets.DEPLOY_KEY}} | |
| command_timeout: 600m | |
| script: | | |
| cd ${{secrets.GADI_SINGULARITY_DIR}} | |
| qsub latest.pbs | |
| development: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Run rsync job | |
| uses: appleboy/ssh-action@v0.1.7 | |
| with: | |
| host: gadi.nci.org.au | |
| username: ${{secrets.GADI_USER}} | |
| key: ${{secrets.DEPLOY_KEY}} | |
| command_timeout: 600m | |
| script: | | |
| cd ${{secrets.GADI_SINGULARITY_DIR}} | |
| qsub development.pbs | |
| experimental: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Run rsync job | |
| uses: appleboy/ssh-action@v0.1.7 | |
| with: | |
| host: gadi.nci.org.au | |
| username: ${{secrets.GADI_USER}} | |
| key: ${{secrets.DEPLOY_KEY}} | |
| command_timeout: 600m | |
| script: | | |
| cd ${{secrets.GADI_SINGULARITY_DIR}} | |
| qsub experimental.pbs |