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conipher_env.yml
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name: conipher
channels:
- bioconda
- conda-forge
- defaults
dependencies:
- _r-mutex=1.0.1=anacondar_1
- appnope=0.1.3=pyhd8ed1ab_0
- attrs=21.4.0=pyhd8ed1ab_0
- backports=1.0=pyhd8ed1ab_3
- backports.functools_lru_cache=1.6.1=py_0
- backports.shutil_get_terminal_size=1.0.0=py_3
- backports_abc=0.5=py_1
- bioconductor-biobase=2.46.0=r36h01d97ff_0
- bioconductor-biocgenerics=0.32.0=r36_0
- bioconductor-biocparallel=1.20.0=r36h6de7cb9_0
- bioconductor-biostrings=2.54.0=r36h01d97ff_0
- bioconductor-delayedarray=0.12.0=r36h01d97ff_0
- bioconductor-genomeinfodb=1.22.0=r36_0
- bioconductor-genomeinfodbdata=1.2.2=r36_0
- bioconductor-genomicalignments=1.22.0=r36h01d97ff_0
- bioconductor-genomicranges=1.38.0=r36h01d97ff_0
- bioconductor-iranges=2.20.0=r36h01d97ff_0
- bioconductor-rhtslib=1.18.0=r36h90b7f41_1
- bioconductor-rsamtools=2.2.0=r36h6de7cb9_0
- bioconductor-rtracklayer=1.46.0=r36h01d97ff_0
- bioconductor-s4vectors=0.24.0=r36h01d97ff_0
- bioconductor-singlecellexperiment=1.8.0=r36_0
- bioconductor-summarizedexperiment=1.16.0=r36_0
- bioconductor-xvector=0.26.0=r36h01d97ff_0
- bioconductor-zlibbioc=1.32.0=r36h01d97ff_0
- bleach=1.4.2=py27_0
- bwidget=1.9.14=h694c41f_1
- bzip2=1.0.8=h0d85af4_4
- ca-certificates=2022.12.7=h033912b_0
- cairo=1.16.0=hec6a9b0_1003
- cctools_osx-64=973.0.1=hcc6d90d_11
- certifi=2019.11.28=py27h8c360ce_1
- clang=14.0.6=h694c41f_0
- clang-14=14.0.6=default_h55ffa42_0
- clang_osx-64=14.0.6=h3113cd8_4
- clangxx=14.0.6=default_h55ffa42_0
- clangxx_osx-64=14.0.6=h6f97653_4
- compiler-rt=14.0.6=h613da45_0
- compiler-rt_osx-64=14.0.6=hab78ec2_0
- configparser=3.7.3=py27h8c360ce_2
- contextlib2=0.6.0.post1=py_0
- curl=7.68.0=h8754def_0
- cycler=0.10.0=py_2
- decorator=4.4.2=py_0
- defusedxml=0.6.0=py_0
- entrypoints=0.3=py27h8c360ce_1001
- enum34=1.1.10=py27h8c360ce_1
- fontconfig=2.13.1=h10f422b_1005
- freetype=2.12.1=h3f81eb7_1
- fribidi=1.0.10=hbcb3906_0
- funcsigs=1.0.2=py_3
- functools32=3.2.3.2=py_3
- futures=3.3.0=py27h8c360ce_1
- gettext=0.21.1=h8a4c099_0
- gfortran_impl_osx-64=7.5.0=hdadd0f8_23
- gfortran_osx-64=7.5.0=h18f7dce_15
- glib=2.66.3=h519c658_0
- gmp=6.2.1=h2e338ed_0
- graphite2=1.3.13=h2e338ed_1001
- gsl=2.5=ha2d443c_1
- harfbuzz=2.4.0=hd8d2a14_3
- html5lib=1.1=pyh9f0ad1d_0
- icu=64.2=h6de7cb9_1
- importlib-metadata=1.5.0=py27h8c360ce_1
- importlib_metadata=1.5.0=1
- ipaddress=1.0.23=py_0
- ipykernel=4.10.0=py27_0
- ipython=5.8.0=py27_1
- ipython_genutils=0.2.0=py_1
- isl=0.22.1=hb1e8313_2
- jinja2=2.11.3=pyh44b312d_0
- jpeg=9e=hac89ed1_2
- jsonschema=3.2.0=py27h8c360ce_1
- jupyter_client=5.3.4=py27_1
- jupyter_core=4.6.3=py27h8c360ce_1
- kiwisolver=1.1.0=py27h5cd23e5_1
- krb5=1.16.4=h1752a42_0
- ld64_osx-64=609=hfd63004_11
- libblas=3.9.0=8_openblas
- libcblas=3.9.0=8_openblas
- libclang-cpp14=14.0.6=default_h55ffa42_0
- libcurl=7.68.0=h709d2b2_0
- libcxx=14.0.6=hccf4f1f_0
- libedit=3.1.20191231=h0678c8f_2
- libffi=3.2.1=1
- libgfortran=4.0.0=7_5_0_h1a10cd1_23
- libgfortran-devel_osx-64=7.5.0=h1a10cd1_23
- libgfortran4=7.5.0=h1a10cd1_23
- libgit2=1.1.1=h14631ed_1
- libglib=2.66.3=h2575888_0
- libiconv=1.17=hac89ed1_0
- liblapack=3.9.0=8_openblas
- libllvm14=14.0.6=h5b596cc_1
- libllvm8=8.0.1=h770b8ee_0
- libopenblas=0.3.12=openmp_h63d9170_1
- libpng=1.6.39=ha978bb4_0
- libsodium=1.0.17=h01d97ff_0
- libsqlite=3.40.0=ha978bb4_0
- libssh2=1.10.0=h7535e13_3
- libtiff=4.1.0=hcb84e12_0
- libxml2=2.9.10=h53d96d6_0
- libzlib=1.2.13=hfd90126_4
- llvm-openmp=15.0.6=h61d9ccf_0
- llvm-tools=14.0.6=h5b596cc_1
- llvmlite=0.31.0=py27h3bd31fb_1
- lz4=2.2.1=py27he1520b0_0
- lz4-c=1.8.3=h6de7cb9_1001
- make=4.3=h22f3db7_1
- markupsafe=1.1.1=py27h89ed719_1
- matplotlib-base=2.2.5=py27h11da6c2_1
- mistune=0.8.4=py27h89ed719_1001
- more-itertools=5.0.0=py_0
- mpc=1.2.1=hbb51d92_0
- mpfr=4.1.0=h0f52abe_1
- nbconvert=5.6.1=py27_0
- nbformat=4.4.0=py_1
- ncurses=6.3=h96cf925_1
- notebook=5.7.8=py27_1
- numba=0.47.0=py27h4f17bb1_0
- numpy=1.16.5=py27hde6bac1_0
- openssl=1.1.1s=hfd90126_1
- pandas=0.24.2=py27h86efe34_0
- pandoc=2.19.2=h694c41f_1
- pandocfilters=1.5.0=pyhd8ed1ab_0
- pango=1.42.4=haa940fe_4
- pathlib2=2.3.5=py27h8c360ce_1
- patsy=0.5.1=py_0
- pcre=8.45=he49afe7_0
- pcre2=10.37=h3f55489_1
- pexpect=4.8.0=pyh1a96a4e_2
- pickleshare=0.7.5=py27h8c360ce_1001
- pip=20.1.1=pyh9f0ad1d_0
- pixman=0.38.0=h01d97ff_1003
- prometheus_client=0.9.0=pyhd3deb0d_0
- prompt_toolkit=1.0.15=py_1
- ptyprocess=0.7.0=pyhd3deb0d_0
- pyclone=0.13.1=py_0
- pydp=0.2.4=py_0
- pygments=2.5.2=py_0
- pyparsing=2.4.7=pyh9f0ad1d_0
- pyrsistent=0.15.7=py27h89ed719_1
- python=2.7.15=h8e446fc_1011_cpython
- python-dateutil=2.8.1=py_0
- python_abi=2.7=1_cp27m
- pytz=2020.1=pyh9f0ad1d_0
- pyyaml=5.3.1=py27h89ed719_0
- pyzmq=19.0.0=py27h74110c0_1
- r-abind=1.4_5=r36h6115d3f_1003
- r-acidbase=0.1.9=r36_0
- r-askpass=1.1=r36h28b5c78_2
- r-assertthat=0.2.1=r36h6115d3f_2
- r-backports=1.2.1=r36h28b5c78_0
- r-base=3.6.1=he15a7b5_6
- r-base64enc=0.1_3=r36h28b5c78_1004
- r-bh=1.75.0_0=r36hc72bb7e_0
- r-biocmanager=1.30.15=r36hc72bb7e_0
- r-bioverbs=0.2.13=r36_0
- r-bitops=1.0_7=r36h28b5c78_0
- r-blob=1.2.1=r36h6115d3f_1
- r-boot=1.3_28=r36hc72bb7e_0
- r-brew=1.0_6=r36h6115d3f_1003
- r-brio=0.3.17=r36_0
- r-broom=0.7.6=r36hc72bb7e_0
- r-bslib=0.2.5.1=r36hc72bb7e_0
- r-cachem=1.0.5=r36h28b5c78_0
- r-callr=3.7.0=r36hc72bb7e_0
- r-car=3.0_10=r36h6115d3f_0
- r-cardata=3.0_4=r36h6115d3f_0
- r-caret=6.0_88=r36h28b5c78_0
- r-cellranger=1.1.0=r36h6115d3f_1003
- r-class=7.3_19=r36h28b5c78_0
- r-cli=2.5.0=r36hc72bb7e_0
- r-clipr=0.7.1=r36h142f84f_0
- r-cluster=2.1.0=r36ha752707_4
- r-codetools=0.2_18=r36hc72bb7e_0
- r-colorspace=2.0_1=r36h28b5c78_0
- r-commonmark=1.7=r36h28b5c78_1002
- r-conquer=1.0.2=r36h3e9696b_1
- r-corrplot=0.88=r36hc72bb7e_0
- r-covr=3.5.1=r36h9951f98_0
- r-cowplot=1.1.1=r36hc72bb7e_0
- r-cpp11=0.2.7=r36hc72bb7e_0
- r-crayon=1.4.1=r36hc72bb7e_0
- r-credentials=1.3.0=r36h6115d3f_0
- r-crosstalk=1.1.1=r36hc72bb7e_0
- r-crul=1.1.0=r36h785f33e_0
- r-curl=4.3.1=r36h28b5c78_0
- r-data.table=1.14.0=r36hf6ff476_0
- r-dbi=1.1.1=r36hc72bb7e_0
- r-dbplyr=2.1.1=r36hc72bb7e_0
- r-desc=1.3.0=r36hc72bb7e_0
- r-devtools=2.4.1=r36hc72bb7e_0
- r-diffobj=0.3.4=r36h28b5c78_0
- r-digest=0.6.27=r36h9951f98_0
- r-dplyr=1.0.6=r36h9951f98_1
- r-dt=0.18=r36hc72bb7e_0
- r-dtplyr=1.1.0=r36hc72bb7e_0
- r-ellipsis=0.3.2=r36h28b5c78_0
- r-essentials=3.6=r36_2002
- r-evaluate=0.14=r36h6115d3f_2
- r-fansi=0.4.2=r36h28b5c78_0
- r-farver=2.1.0=r36h9951f98_0
- r-fastmap=1.1.0=r36h9951f98_0
- r-forcats=0.5.1=r36hc72bb7e_0
- r-foreach=1.5.1=r36h142f84f_0
- r-foreign=0.8_76=r36h17f1fa6_1
- r-formatr=1.9=r36hc72bb7e_0
- r-fs=1.5.0=r36h710217c_0
- r-fst=0.9.0=r36h466af19_0
- r-futile.logger=1.4.3=r36h6115d3f_1003
- r-futile.options=1.0.1=r36h6115d3f_1002
- r-gargle=1.1.0=r36hc72bb7e_0
- r-gdata=2.18.0=r36h6115d3f_1003
- r-generics=0.1.0=r36hc72bb7e_0
- r-gert=1.3.0=r36h8f67e68_0
- r-ggplot2=3.3.3=r36hc72bb7e_0
- r-ggpubr=0.4.0=r36h6115d3f_0
- r-ggrepel=0.9.1=r36h815b84a_0
- r-ggsci=2.9=r36h6115d3f_1003
- r-ggsignif=0.6.1=r36hc72bb7e_0
- r-gh=1.3.0=r36hc72bb7e_0
- r-gistr=0.9.0=r36h6115d3f_0
- r-git2r=0.28.0=r36h4eca85e_0
- r-gitcreds=0.1.1=r36hc72bb7e_0
- r-glmnet=4.0_2=r36ha752707_1
- r-glue=1.4.2=r36h066c5db_0
- r-goalie=0.4.4=r36_0
- r-googledrive=1.0.1=r36h6115d3f_1
- r-googlesheets4=0.3.0=r36hbe3e9c8_0
- r-gower=0.2.2=r36h17f1fa6_0
- r-gridextra=2.3=r36h6115d3f_1003
- r-gtable=0.3.0=r36h6115d3f_3
- r-gtools=3.8.2=r36h17f1fa6_1
- r-haven=2.4.1=r36h8a02945_0
- r-hexbin=1.28.1=r36ha752707_2
- r-highr=0.9=r36hc72bb7e_0
- r-hms=1.1.0=r36hc72bb7e_0
- r-htmltools=0.5.1.1=r36h9951f98_0
- r-htmlwidgets=1.5.3=r36hc72bb7e_0
- r-httpcode=0.3.0=r36_1
- r-httpuv=1.6.1=r36h9951f98_0
- r-httr=1.4.2=r36h6115d3f_0
- r-ids=1.0.1=r36h6115d3f_1
- r-ini=0.3.1=r36h6115d3f_1003
- r-ipred=0.9_11=r36h28b5c78_0
- r-irdisplay=1.0=r36hd8ed1ab_0
- r-irkernel=1.2=r36hc72bb7e_0
- r-isoband=0.2.4=r36h9951f98_0
- r-iterators=1.0.13=r36h142f84f_0
- r-jquerylib=0.1.4=r36hc72bb7e_0
- r-jsonlite=1.7.2=r36h066c5db_0
- r-kernsmooth=2.23_18=r36h528b35d_0
- r-knitr=1.33=r36hc72bb7e_0
- r-labeling=0.4.2=r36h142f84f_0
- r-lambda.r=1.2.4=r36h6115d3f_1
- r-later=1.2.0=r36h9951f98_0
- r-lattice=0.20_44=r36h28b5c78_0
- r-lava=1.6.9=r36hc72bb7e_0
- r-lazyeval=0.2.2=r36h28b5c78_2
- r-lifecycle=1.0.0=r36hc72bb7e_0
- r-lme4=1.1_27=r36h9951f98_0
- r-lubridate=1.7.10=r36h9951f98_0
- r-magrittr=2.0.1=r36h066c5db_1
- r-maps=3.3.0=r36h17f1fa6_1004
- r-maptools=1.1_1=r36h28b5c78_0
- r-markdown=1.1=r36h066c5db_1
- r-mass=7.3_54=r36h28b5c78_0
- r-matrix=1.3_3=r36hc2c5f09_0
- r-matrixmodels=0.5_0=r36hc72bb7e_0
- r-matrixstats=0.58.0=r36hf6ff476_0
- r-memoise=2.0.0=r36hc72bb7e_0
- r-mgcv=1.8_35=r36hc2c5f09_0
- r-mime=0.10=r36hf6ff476_0
- r-minqa=1.2.4=r36hf6e00eb_1006
- r-modelmetrics=1.2.2.2=r36hc5da6b9_1
- r-modelr=0.1.8=r36h6115d3f_0
- r-munsell=0.5.0=r36h6115d3f_1003
- r-nlme=3.1_150=r36ha752707_0
- r-nloptr=1.2.2.2=r36hc5da6b9_0
- r-nnet=7.3_16=r36h28b5c78_0
- r-numderiv=2016.8_1.1=r36h6115d3f_3
- r-openssl=1.4.4=r36hd95e000_0
- r-openxlsx=4.2.3=r36h342fd00_0
- r-pbdzmq=0.3_3.1=r36hcc87dfa_0
- r-pbkrtest=0.5.1=r36hc72bb7e_0
- r-pillar=1.6.1=r36hc72bb7e_0
- r-pkgbuild=1.2.0=r36hc72bb7e_0
- r-pkgconfig=2.0.3=r36h6115d3f_1
- r-pkgload=1.2.1=r36h9951f98_0
- r-plyr=1.8.6=r36hc5da6b9_1
- r-polynom=1.4_0=r36h6115d3f_2
- r-praise=1.0.0=r36h6115d3f_1004
- r-prettyunits=1.1.1=r36h6115d3f_1
- r-proc=1.17.0.1=r36h815b84a_0
- r-processx=3.5.2=r36h28b5c78_0
- r-prodlim=2019.11.13=r36hc5da6b9_1
- r-progress=1.2.2=r36h6115d3f_2
- r-promises=1.2.0.1=r36h9951f98_0
- r-pryr=0.1.4=r36hc5da6b9_1004
- r-ps=1.6.0=r36h28b5c78_0
- r-purrr=0.3.4=r36h28b5c78_1
- r-quantmod=0.4.18=r36hc72bb7e_0
- r-quantreg=5.75=r36hcbf56c9_0
- r-r.methodss3=1.8.1=r36h6115d3f_0
- r-r.oo=1.24.0=r36h6115d3f_0
- r-r.utils=2.10.1=r36h6115d3f_0
- r-r6=2.5.0=r36hc72bb7e_0
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